Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs73100941 chr2:238438672 G/A 3.59E-8 497 31.53 31.47 34.1 KM Plot
THCA rs73117551 chr2:234353206 G/A 9.6E-7 502 31.67 31 26.45 KM Plot
THCA rs73117559 chr2:234359774 C/A 1.51E-6 486 31.67 28.33 26.45 KM Plot
THCA rs7312132 chr12:110352509 G/C 0.000111 500 31.9 30.55 23.83 KM Plot
THCA rs73132397 chr20:47222226 C/T 0 502 31.53 32.1 6.78 KM Plot
THCA rs7313536 chr12:104602537 G/A 2.16E-5 499 31.93 29.37 16.8 KM Plot
THCA rs73135753 chr20:47244663 C/T 0 502 31.6 32.03 7.77 KM Plot
THCA rs73136396 chr20:47337174 T/A 4.19E-9 501 31.5 32.1 18.22 KM Plot
THCA rs73138126 chr20:47249313 C/T 0 503 31.47 33.27 7.77 KM Plot
THCA rs73138221 chr20:47349525 T/C 8.13E-9 502 31.47 32.9 18.22 KM Plot
THCA rs73157336 chr20:61474197 C/G 8.98E-5 500 31 34.53 42.67 KM Plot
THCA rs73157353 chr20:61484142 A/G 5.43E-5 496 31 33.87 37.48 KM Plot
THCA rs73184376 chr8:8268336 G/A 1.12E-6 487 32.03 28 25.03 KM Plot
THCA rs73193842 chr3:122580122 G/A 1.31E-7 500 32.1 23.63 18.38 KM Plot
THCA rs73220932 chr3:139253489 G/T 4.67E-5 503 31.53 33.45 19.32 KM Plot